Sinapic acid

Identification

Generic Name
Sinapic acid
DrugBank Accession Number
DB08587
Background

Sinapic acid is a matrix for matrix-assisted laser desorption technique for protein MW determination. It is also a constituent of propolis.

Type
Small Molecule
Groups
Experimental
Structure
Weight
Average: 224.21
Monoisotopic: 224.068473494
Chemical Formula
C11H12O5
Synonyms
  • (E)-3-(4-Hydroxy-3,5-dimethoxyphenyl)-2-propenoic acid
  • Sinapinate
  • Sinapinic acid
  • trans-sinapic acid

Pharmacology

Indication

Not Available

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Pharmacodynamics

Not Available

Mechanism of action
TargetActionsOrganism
UEndo-1,4-beta-xylanase YNot AvailableClostridium thermocellum
Absorption

Not Available

Volume of distribution

Not Available

Protein binding

Not Available

Metabolism
Not Available
Route of elimination

Not Available

Half-life

Not Available

Clearance

Not Available

Adverse Effects
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Toxicity

Not Available

Pathways
Not Available
Pharmacogenomic Effects/ADRs
Not Available

Interactions

Drug Interactions
This information should not be interpreted without the help of a healthcare provider. If you believe you are experiencing an interaction, contact a healthcare provider immediately. The absence of an interaction does not necessarily mean no interactions exist.
Not Available
Food Interactions
Not Available

Categories

Drug Categories
Chemical TaxonomyProvided by Classyfire
Description
This compound belongs to the class of organic compounds known as hydroxycinnamic acids. These are compounds containing an cinnamic acid where the benzene ring is hydroxylated.
Kingdom
Organic compounds
Super Class
Phenylpropanoids and polyketides
Class
Cinnamic acids and derivatives
Sub Class
Hydroxycinnamic acids and derivatives
Direct Parent
Hydroxycinnamic acids
Alternative Parents
Coumaric acids and derivatives / Cinnamic acids / Methoxyphenols / Dimethoxybenzenes / Styrenes / Phenoxy compounds / Anisoles / Alkyl aryl ethers / Monocarboxylic acids and derivatives / Carboxylic acids
show 3 more
Substituents
Alkyl aryl ether / Anisole / Aromatic homomonocyclic compound / Benzenoid / Carbonyl group / Carboxylic acid / Carboxylic acid derivative / Cinnamic acid / Coumaric acid or derivatives / Dimethoxybenzene
show 15 more
Molecular Framework
Aromatic homomonocyclic compounds
External Descriptors
3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid (CHEBI:15714) / Sinapate derivatives (C00482)
Affected organisms
Not Available

Chemical Identifiers

UNII
P0I60993EC
CAS number
7362-37-0
InChI Key
PCMORTLOPMLEFB-ONEGZZNKSA-N
InChI
InChI=1S/C11H12O5/c1-15-8-5-7(3-4-10(12)13)6-9(16-2)11(8)14/h3-6,14H,1-2H3,(H,12,13)/b4-3+
IUPAC Name
(2E)-3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoic acid
SMILES
COC1=CC(\C=C\C(O)=O)=CC(OC)=C1O

References

General References
Not Available
Human Metabolome Database
HMDB0032616
KEGG Compound
C00482
PubChem Compound
637775
PubChem Substance
99445058
ChemSpider
553361
BindingDB
50341142
ChEBI
15714
ChEMBL
CHEMBL109341
ZINC
ZINC000000153654
PDBe Ligand
SXX
Wikipedia
Sinapinic_acid
PDB Entries
1wb4 / 4q8b / 8iyc

Clinical Trials

Clinical Trials
PhaseStatusPurposeConditionsCount

Pharmacoeconomics

Manufacturers
Not Available
Packagers
Not Available
Dosage Forms
Not Available
Prices
Not Available
Patents
Not Available

Properties

State
Solid
Experimental Properties
Not Available
Predicted Properties
PropertyValueSource
Water Solubility0.631 mg/mLALOGPS
logP1.63ALOGPS
logP1.52Chemaxon
logS-2.6ALOGPS
pKa (Strongest Acidic)3.41Chemaxon
pKa (Strongest Basic)-4.6Chemaxon
Physiological Charge-1Chemaxon
Hydrogen Acceptor Count5Chemaxon
Hydrogen Donor Count2Chemaxon
Polar Surface Area75.99 Å2Chemaxon
Rotatable Bond Count4Chemaxon
Refractivity57.97 m3·mol-1Chemaxon
Polarizability22.32 Å3Chemaxon
Number of Rings1Chemaxon
Bioavailability1Chemaxon
Rule of FiveYesChemaxon
Ghose FilterYesChemaxon
Veber's RuleNoChemaxon
MDDR-like RuleNoChemaxon
Predicted ADMET Features
PropertyValueProbability
Human Intestinal Absorption+0.9578
Blood Brain Barrier+0.5785
Caco-2 permeable+0.7324
P-glycoprotein substrateNon-substrate0.5655
P-glycoprotein inhibitor INon-inhibitor0.873
P-glycoprotein inhibitor IINon-inhibitor0.8588
Renal organic cation transporterNon-inhibitor0.9159
CYP450 2C9 substrateNon-substrate0.7999
CYP450 2D6 substrateNon-substrate0.8919
CYP450 3A4 substrateNon-substrate0.6052
CYP450 1A2 substrateNon-inhibitor0.8445
CYP450 2C9 inhibitorNon-inhibitor0.838
CYP450 2D6 inhibitorNon-inhibitor0.9297
CYP450 2C19 inhibitorNon-inhibitor0.7182
CYP450 3A4 inhibitorNon-inhibitor0.8748
CYP450 inhibitory promiscuityLow CYP Inhibitory Promiscuity0.7608
Ames testNon AMES toxic0.9023
CarcinogenicityNon-carcinogens0.8848
BiodegradationReady biodegradable0.5854
Rat acute toxicity2.2035 LD50, mol/kg Not applicable
hERG inhibition (predictor I)Weak inhibitor0.9815
hERG inhibition (predictor II)Non-inhibitor0.9688
ADMET data is predicted using admetSAR, a free tool for evaluating chemical ADMET properties. (23092397)

Spectra

Mass Spec (NIST)
Not Available
Spectra
SpectrumSpectrum TypeSplash Key
GC-MS Spectrum - GC-MS (2 TMS)GC-MSsplash10-00kr-3759000000-26099df97cd2adef2dc3
Predicted GC-MS Spectrum - GC-MSPredicted GC-MSsplash10-05di-1950000000-308e223e0595ec83666c
GC-MS Spectrum - EI-BGC-MSsplash10-00di-4390000000-ce04c31c3e4023faa7ee
GC-MS Spectrum - GC-EI-TOFGC-MSsplash10-00kr-2759000000-404687968a18ced29cd9
GC-MS Spectrum - GC-EI-TOFGC-MSsplash10-00kr-1869000000-618d42ab9681ecb06228
GC-MS Spectrum - GC-EI-TOFGC-MSsplash10-00di-9535000000-dc1aa60962d61ce2d9bb
GC-MS Spectrum - GC-EI-TOFGC-MSsplash10-00di-9636000000-15691f6a00fd74dadf7a
GC-MS Spectrum - GC-MSGC-MSsplash10-00kr-3759000000-26099df97cd2adef2dc3
GC-MS Spectrum - GC-EI-TOFGC-MSsplash10-000i-1966000000-84b6d21b3c65f74d1b2d
Mass Spectrum (Electron Ionization)MSsplash10-00di-5590000000-92339c0e84f7bfd7f855
MS/MS Spectrum - DI-ESI-qTof , PositiveLC-MS/MSsplash10-002e-0900000000-c7f7d78d04b4c61a02e1
MS/MS Spectrum - DI-ESI-qTof , NegativeLC-MS/MSsplash10-0007-0900000000-76cfe991af651e6cec19
LC-MS/MS Spectrum - LC-ESI-QQ , negativeLC-MS/MSsplash10-00di-0290000000-475d3684fdd4228e9c5d
LC-MS/MS Spectrum - LC-ESI-QQ , negativeLC-MS/MSsplash10-08fr-0940000000-780771eea370a78b609a
LC-MS/MS Spectrum - LC-ESI-QQ , negativeLC-MS/MSsplash10-0002-1900000000-3e127fbdcf11519a02f3
LC-MS/MS Spectrum - LC-ESI-QQ , negativeLC-MS/MSsplash10-00dl-3900000000-d41ed2853570e017a98c
LC-MS/MS Spectrum - LC-ESI-QQ , negativeLC-MS/MSsplash10-006x-9600000000-668bfef76d2c29514216
LC-MS/MS Spectrum - LC-ESI-QTOF , negativeLC-MS/MSsplash10-00di-1950000000-845dcc12144449b6b8c5
LC-MS/MS Spectrum - LC-ESI-QTOF , negativeLC-MS/MSsplash10-074m-1940000000-4eaf9a539449ae53a970
LC-MS/MS Spectrum - LC-ESI-QTOF , positiveLC-MS/MSsplash10-0a4i-1590000000-f69ac29a002b25accd73
LC-MS/MS Spectrum - LC-ESI-QTOF , positiveLC-MS/MSsplash10-0ar4-3940000000-64d09640303051f3b774
Predicted MS/MS Spectrum - 10V, Positive (Annotated)Predicted LC-MS/MSsplash10-002f-0950000000-eb19569368fc7a92dcda
Predicted MS/MS Spectrum - 10V, Negative (Annotated)Predicted LC-MS/MSsplash10-00fr-0790000000-22f1e2e06197c81b77e1
Predicted MS/MS Spectrum - 20V, Negative (Annotated)Predicted LC-MS/MSsplash10-03dj-1900000000-0c4987b9eddcadb73a34
Predicted MS/MS Spectrum - 20V, Positive (Annotated)Predicted LC-MS/MSsplash10-056s-0920000000-5fb1a4f8b097c616c904
Predicted MS/MS Spectrum - 40V, Negative (Annotated)Predicted LC-MS/MSsplash10-01p5-4900000000-0f345a6c963f2a3b2cfa
Predicted MS/MS Spectrum - 40V, Positive (Annotated)Predicted LC-MS/MSsplash10-0a4i-0900000000-9ce990566d4e92ac10c6
1H NMR Spectrum1D NMRNot Applicable
13C NMR Spectrum1D NMRNot Applicable
Predicted 1H NMR Spectrum1D NMRNot Applicable
Predicted 13C NMR Spectrum1D NMRNot Applicable
Chromatographic Properties
Collision Cross Sections (CCS)
AdductCCS Value (Å2)Source typeSource
[M-H]-165.3240581
predicted
DarkChem Lite v0.1.0
[M-H]-165.2825581
predicted
DarkChem Lite v0.1.0
[M-H]-151.2093
predicted
DeepCCS 1.0 (2019)
[M+H]+166.6111581
predicted
DarkChem Lite v0.1.0
[M+H]+166.0429581
predicted
DarkChem Lite v0.1.0
[M+H]+153.5673
predicted
DeepCCS 1.0 (2019)
[M+Na]+165.9974581
predicted
DarkChem Lite v0.1.0
[M+Na]+165.8315581
predicted
DarkChem Lite v0.1.0
[M+Na]+159.66046
predicted
DeepCCS 1.0 (2019)

Targets

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Kind
Protein
Organism
Clostridium thermocellum
Pharmacological action
Unknown
General Function
Endo-1,4-beta-xylanase activity
Specific Function
Not Available
Gene Name
xynY
Uniprot ID
P51584
Uniprot Name
Endo-1,4-beta-xylanase Y
Molecular Weight
119671.86 Da
References
  1. Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE: The Protein Data Bank. Nucleic Acids Res. 2000 Jan 1;28(1):235-42. [Article]

Drug created at September 15, 2010 21:33 / Updated at June 12, 2020 16:52